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Why not use the -b argument to generate BRAW files? · Issue #36 ...

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problems of CCMpred compiling · Issue #41 · soedinglab/CCMpred · GitHub

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Bug in CCMpred (CUDA) · Issue #6 · soedinglab/CCMpred · GitHub

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[Feature Request] Option to choose between MMSeqs2 and Diamond? · Issue ...

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compile from source have some problems · Issue #48 · soedinglab/metaeuk ...

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What does `pairaln` do? · Issue #628 · soedinglab/MMseqs2 · GitHub

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Not support very long chromosomes? · Issue #61 · soedinglab/metaeuk ...

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No unique gene file generated · Issue #665 · soedinglab/MMseqs2 · GitHub

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